Transcriptome
Transcriptome related to strains in RhizobiaWiki.
Gene | Annotation | SRR7145598 | SRR7145599 | SRR7145698 | SRR7145723 |
---|---|---|---|---|---|
RTCIAT899_CH00005 | putative phosphotransferase | 1 | 1 | 2 | 2 |
RTCIAT899_CH00010 | hypothetical protein | 0 | 0 | 1 | 0 |
RTCIAT899_CH00015 | shikimate 5-dehydrogenase | 1 | 1 | 0 | 0 |
RTCIAT899_CH00020 | dephospho-CoA kinase | 0 | 2 | 0 | 1 |
RTCIAT899_CH00025 | DNA polymerase III, epsilon subunit | 3 | 3 | 8 | 3 |
RTCIAT899_CH00030 | protein-export chaperone SecB | 5 | 9 | 9 | 5 |
RTCIAT899_CH00035 | FxsA cytoplasmic membrane protein | 2 | 1 | 4 | 1 |
RTCIAT899_CH00040 | import inner membrane translocase subunit Tim44 | 3 | 1 | 1 | 5 |
RTCIAT899_CH00045 | membrane-bound lytic murein transglycosylase | 3 | 0 | 3 | 5 |
RTCIAT899_CH00050 | DNA repair protein, Smr/MutS family | 0 | 0 | 0 | 0 |
Gene | Annotation | Module | Correlation |
---|---|---|---|
RTCIAT899_CH00005 | putative phosphotransferase | 2 | 0.985 |
RTCIAT899_CH00010 | hypothetical protein | 4 | 0.998 |
RTCIAT899_CH00015 | shikimate 5-dehydrogenase | 2 | -0.948 |
RTCIAT899_CH00020 | dephospho-CoA kinase | 12 | 0.984 |
RTCIAT899_CH00025 | DNA polymerase III, epsilon subunit | 4 | 0.955 |
RTCIAT899_CH00030 | protein-export chaperone SecB | 13 | -0.959 |
RTCIAT899_CH00035 | FxsA cytoplasmic membrane protein | 4 | 0.979 |
RTCIAT899_CH00040 | import inner membrane translocase subunit Tim44 | 1 | 0.957 |
RTCIAT899_CH00045 | membrane-bound lytic murein transglycosylase | 1 | 0.922 |
RTCIAT899_CH00050 | DNA repair protein, Smr/MutS family | unassigned | NaN |